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Stepwise protein-mediated RNA folding directs assembly of telomerase ribonucleoprotein.

Stone, M.D., Mihalusova, M., O'Connor C, M., Prathapam, R., Collins, K., and Zhuang, X. (2007). Nature 446, 458-461.

 
Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque.

Nollmann, M., Stone, M.D., Bryant, Z., Gore, J., Crisona, N. J., Hong, S. C., Mitelheiser, S., Maxwell, A., Bustamante, C., and Cozzarelli, N. R. (2007). Nat Struct Mol Biol 14, 264-271.
 
Mechanochemical analysis of DNA gyrase using rotor bead tracking.

Gore, J., Bryant, Z., Stone, M.D., Nollmann, M., Cozzarelli, N. R., and Bustamante, C. (2006). Nature 439, 100-104.
 
Structural transitions and elasticity from torque measurements on DNA.

Bryant, Z., Stone, M.D., Gore, J., Smith, S. B., Cozzarelli, N. R., and Bustamante, C. (2003). Nature 424, 338-341.
 
Chirality sensing by Escherichia coli topoisomerase IV and the mechanism of type II topoisomerases.

Stone, M.D., Bryant, Z., Crisona, N. J., Smith, S. B., Vologodskii, A., Bustamante, C., and Cozzarelli, N. R. (2003). Proc Natl Acad Sci U S A 100, 8654-8659.